D] Map X,Y coordinates of text to data frame like structure

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I have a table document(3-columns fixed) which when passed through an ocr gives me the text ,mid x-coordinate and mid y-coordinate of the corresponding text. Apparently when all the text is detected i use simple distance based metric to make a table structure using the top 3 header coordinate and then classifying all the points into respective columns. Now when all the text is not detected(say the ocr fails to get 1 text in column B) i have a different length and a dataframe could not be formed.

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